{"id":5760,"date":"2020-04-30T18:13:26","date_gmt":"2020-04-30T23:13:26","guid":{"rendered":"http:\/\/steve.cooleysekula.net\/blog\/?p=5760"},"modified":"2020-04-30T18:25:50","modified_gmt":"2020-04-30T23:25:50","slug":"racing-toward-25","status":"publish","type":"post","link":"https:\/\/steve.cooleysekula.net\/blog\/2020\/04\/30\/racing-toward-25\/","title":{"rendered":"Racing toward 25%"},"content":{"rendered":"\n<p>Friday (tomorrow) is the day that Texas&#8217;s Governor allows all businesses to reopen, but only if they cap their in-house customers at 25% of capacity for their facility. So where is my county, Collin County, right now? <\/p>\n\n\n\n<p>Anticipating this &#8220;momentous&#8221; day of continuing to re-open businesses in Texas, Collin County is stalled in its fight against the spread of SARS-CoV-2. <\/p>\n\n\n\n<figure class=\"wp-block-image size-large\"><img loading=\"lazy\" decoding=\"async\" width=\"1024\" height=\"683\" src=\"https:\/\/steve.cooleysekula.net\/blog\/wp-content\/uploads\/2020\/04\/Collin_New_Cases-2-1024x683.png\" alt=\"\" class=\"wp-image-5761\" srcset=\"https:\/\/steve.cooleysekula.net\/blog\/wp-content\/uploads\/2020\/04\/Collin_New_Cases-2-1024x683.png 1024w, https:\/\/steve.cooleysekula.net\/blog\/wp-content\/uploads\/2020\/04\/Collin_New_Cases-2-300x200.png 300w, https:\/\/steve.cooleysekula.net\/blog\/wp-content\/uploads\/2020\/04\/Collin_New_Cases-2-768x512.png 768w, https:\/\/steve.cooleysekula.net\/blog\/wp-content\/uploads\/2020\/04\/Collin_New_Cases-2.png 1200w\" sizes=\"auto, (max-width: 1024px) 100vw, 1024px\" \/><figcaption>Data for Collin County, TX. (PINK SOLID) The number of new cases per day, averaged over the previous 7 days. (PURPLE DASHED) The number of new cases reported on a given day. (BLUE ARROWS) Key events in Texas regarding policy and COVID-19. (BLACK NUMBERS) The doubling rate of new cases, computed by fitting an exponential growth function to the prior 7 days of data. <\/figcaption><\/figure>\n\n\n\n<p>Early on in the pandemic, Collin County achieved a 2-day doubling time for new cases.  This is nothing to be proud of; the shorter the doubling rate, the faster the deadly disease spreads. Those early numbers and their rise is due to two effects: the spread of the virus, and the ramp-up of disease testing capability (<em>when you look, you  always find the cases that were already there<\/em> <em>in plain sight<\/em>). <\/p>\n\n\n\n<p>We peaked in new reported COVID-19 cases per day about 35 days after the first reported case in Collin County. It was around that time that the shelter-in-place orders put into effect between days 19-26 after first-reported-infection kicked in. We came down fast. Rather than doubling every 9 days (our rate when we hit the peak number of new cases per day) we fell to a low of about 10 new cases per day and a doubling rate of 35 days.<\/p>\n\n\n\n<p>That was the best we did. Coincidence or not, about 15 days after the CDC recommended everyone wear a face covering (note that they recommended a <em>covering<\/em>, independent of its ability to stop infection), we bounced. New infections each day began to climb again, and our new-case doubling rate worsened to every 20 days. We&#8217;ve wobbled there now for days.<\/p>\n\n\n\n<p>The Governor allowed all businesses to reopen for delivery or pickup about 6 days ago. Tomorrow, Texas businesses can accept people into their establishment so long as not more than 25% of capacity is utilized and social distancing is observed.<\/p>\n\n\n\n<p>But in Collin County, TX, we are not seeing declining infection rates. We are hovering. And opening up more, now, will only lead to more spread of the virus.<\/p>\n\n\n\n<h2 class=\"wp-block-heading\">Notes<\/h2>\n\n\n\n<p>The plot is made using data from the <a href=\"https:\/\/dshs.texas.gov\/news\/updates.shtm#coronavirus\">Texas Department of Health<\/a>. Collin County reported cases are updated daily by about noon, US Central Time. The actual figure is made using Python, specifically:<\/p>\n\n\n\n<ul class=\"wp-block-list\"><li>MatPlotLib: graphical representation of data<\/li><li>Pandas: data storage and analysis, including averaging over sequential days<\/li><li>SciPy: curve fitting an exponential growth function to ranges of data<\/li><li>Seaborn: high-quality time-series plotting<\/li><\/ul>\n","protected":false},"excerpt":{"rendered":"<p>Friday (tomorrow) is the day that Texas&#8217;s Governor allows all businesses to reopen, but only if they cap their in-house customers at 25% of capacity for their facility. So where is my county, Collin County, right now? Anticipating this &#8220;momentous&#8221; day of continuing to re-open businesses in Texas, Collin County is stalled in its fight [&hellip;]<\/p>\n","protected":false},"author":2,"featured_media":5761,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"_jetpack_memberships_contains_paid_content":false,"activitypub_content_warning":"","activitypub_content_visibility":"","activitypub_max_image_attachments":3,"activitypub_interaction_policy_quote":"anyone","activitypub_status":"","footnotes":"","jetpack_publicize_message":"","jetpack_publicize_feature_enabled":true,"jetpack_social_post_already_shared":false,"jetpack_social_options":{"image_generator_settings":{"template":"highway","default_image_id":0,"font":"","enabled":false},"version":2}},"categories":[7],"tags":[],"class_list":{"0":"post-5760","1":"post","2":"type-post","3":"status-publish","4":"format-standard","5":"has-post-thumbnail","7":"category-life","8":"czr-hentry"},"jetpack_publicize_connections":[],"jetpack_featured_media_url":"https:\/\/steve.cooleysekula.net\/blog\/wp-content\/uploads\/2020\/04\/Collin_New_Cases-2.png","jetpack_sharing_enabled":true,"_links":{"self":[{"href":"https:\/\/steve.cooleysekula.net\/blog\/wp-json\/wp\/v2\/posts\/5760","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/steve.cooleysekula.net\/blog\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/steve.cooleysekula.net\/blog\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/steve.cooleysekula.net\/blog\/wp-json\/wp\/v2\/users\/2"}],"replies":[{"embeddable":true,"href":"https:\/\/steve.cooleysekula.net\/blog\/wp-json\/wp\/v2\/comments?post=5760"}],"version-history":[{"count":4,"href":"https:\/\/steve.cooleysekula.net\/blog\/wp-json\/wp\/v2\/posts\/5760\/revisions"}],"predecessor-version":[{"id":5765,"href":"https:\/\/steve.cooleysekula.net\/blog\/wp-json\/wp\/v2\/posts\/5760\/revisions\/5765"}],"wp:featuredmedia":[{"embeddable":true,"href":"https:\/\/steve.cooleysekula.net\/blog\/wp-json\/wp\/v2\/media\/5761"}],"wp:attachment":[{"href":"https:\/\/steve.cooleysekula.net\/blog\/wp-json\/wp\/v2\/media?parent=5760"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/steve.cooleysekula.net\/blog\/wp-json\/wp\/v2\/categories?post=5760"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/steve.cooleysekula.net\/blog\/wp-json\/wp\/v2\/tags?post=5760"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}